Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_4357681_4357788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4357681 - 4357788

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTAGG

5'SS Class:

major

3'SS Sequence:

CCACTTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATCAT

U12 Branch Point Sequence:

TGTTGGCCACTT

Flanking Amino Acid:

VQDRDLLVLDVPGVAENRPS

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.3

68.8

43.8

Major BPS

57.9

0.2

1.4

44.2

Major PPT

66.1

0.36

60.4

40.1

Minor 5ss

31.1

-2.2

2.6

32.7

34.9

Minor BPS

33.9

-1.1

2.6

57.25

45.6

Associated Gene:

Gene:

MOV10

Ensembl Gene ID:

ENSAPLG00000015955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016673

4353969 - 4360735

6767