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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4357943_4358057_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4357943 - 4358057

Intron Length:
115

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTGAGTGCT

5'SS Class:
major

3'SS Sequence:
CGCTGGCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGACAC

U12 Branch Point Sequence:
GGCACGGTGACA

Flanking Amino Acid:
TDPASSWVKMLSLLEAPLHA

Intron Amino Acid Position:
492

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71
0.5
1.1
68.2
36.6

Major BPS
46
-0.2
1.3
52.4
43.3

Major PPT
61
0.25
0.9
49.8
39.4

Minor 5ss
32.8
-2
3.3
51.5
44.9

Minor BPS
39.5
-0.8
2.5
48.43
42

Associated Gene:

Gene:
MOV10

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4353969 - 4360735
6767