Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_4359403_4360091_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4359403 - 4360091

Intron Length:

689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTATGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTGAA

U12 Branch Point Sequence:

TCCACTTGAAAC

Flanking Amino Acid:

RTIYGGEFRARTDTKMPSFS

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

65.8

0.39

57.3

39.4

Major PPT

0.63

0.9

73.1

36.2

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

49.4

-0

1.6

56.97

41.6

Associated Gene:

Gene:

MOV10

Ensembl Gene ID:

ENSAPLG00000015955

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016673

4353969 - 4360735

6767