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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4363844_4364398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4363844 - 4364398

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

ACTACTATAACT

Flanking Amino Acid:

IIENAENEYQTAISENYQTM

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

27.6

Major BPS

0.6

65.6

41.1

Major PPT

80.8

0.69

0.9

74.4

Minor 5ss

38.2

-1.3

48.6

47.1

Minor BPS

60.4

0.41

1.7

76.06

40.4

Associated Gene:

Gene:

CAPZA1

Ensembl Gene ID:

ENSAPLG00000015264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022099

4363703 - 4369329

5627

ENSAPLT00000015937

4362835 - 4367765

4931