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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4368635_4368880_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4368635 - 4368880

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

CCTATCTGAACA

Flanking Amino Acid:

PPGEFNEVFNDVRLLLNNDN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.5

41.9

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

91.5

0.93

0.6

84.7

30.2

Minor 5ss

35.3

-1.7

2.7

39.4

40.3

Minor BPS

57.8

0.24

1.5

64.33

42.1

Associated Gene:

Gene:

CAPZA1

Ensembl Gene ID:

ENSAPLG00000015264

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022099

4363703 - 4369329

5627