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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4461072_4463179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4461072 - 4463179

Intron Length:

2108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

GCCGCAGTGACC

Flanking Amino Acid:

LAAAESRHRKVILDLEEERQ

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

72.5

0.51

1.1

69.1

41.8

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

40.8

-0.7

2.2

47.02

42.7

Associated Gene:

Gene:

CTTNBP2NL

Ensembl Gene ID:

ENSAPLG00000020349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033392

4456072 - 4491769

35698