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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4533096_4533633_R

Intron Information:

Intron Rank:

138734

Intron Class:

major

Intron Phase:

Intron Coordinates:

4533096 - 4533633

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TGGGTATAAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

74.5

0.61

79.6

29.1

Major PPT

86.1

0.81

0.8

80.7

31.3

Minor 5ss

35.7

-1.6

48.8

Minor BPS

44.1

-0.4

1.9

52.11

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026009

4527699 - 4534471

6773