Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_4821584_4821685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4821584 - 4821685

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCGGC

5'SS Class:

major

3'SS Sequence:

GCTTCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

GGGTGCTGAAGC

Flanking Amino Acid:

RHLDGAHYRADGALLLGASG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

58.1

Major BPS

0.42

1.1

57.3

41.7

Major PPT

75.4

0.57

0.8

69.4

31.2

Minor 5ss

29.8

-2.3

3.5

40.6

Minor BPS

44.8

-0.4

2.1

52.7

44.3

Associated Gene:

Gene:

WDR77

Ensembl Gene ID:

ENSAPLG00000013403

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013964

4820649 - 4825179

4531