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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4831096_4831512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4831096 - 4831512

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTCTTCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAG

U12 Branch Point Sequence:

CTTTCAGTGACT

Flanking Amino Acid:

AQNGDFSAAGRPAHGSSQYS

Intron Amino Acid Position:

1214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

63.7

0.34

1.6

39.9

Major PPT

79.2

0.66

0.8

36.6

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

53.3

0.18

2.3

80.28

41.8

Associated Gene:

Gene:

C6orf132

Ensembl Gene ID:

ENSAPLG00000017218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044068

4830990 - 4850470

19481

ENSAPLT00000037775

4830990 - 4850470

19481