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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4874155_4874867_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4874155 - 4874867

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATGAA

U12 Branch Point Sequence:

CAGAGATGAAGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.6

37.4

Major BPS

51.5

0.04

1.2

43.5

39.2

Major PPT

0.72

0.7

80.4

24.9

Minor 5ss

34.4

-1.8

3.2

45.9

42.3

Minor BPS

35.6

-1.1

2.1

38.14

39.6

Associated Gene:

Gene:

IRF6

Ensembl Gene ID:

ENSAPLG00000009319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037594

4873965 - 4881088

7124