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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4874155_4877305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4874155 - 4877305

Intron Length:

3151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATTAC

U12 Branch Point Sequence:

CTGCTATTACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.6

37.4

Major BPS

62.5

0.31

1.1

55.4

Major PPT

78.3

0.64

0.8

73.4

31.5

Minor 5ss

34.4

-1.8

3.2

45.9

42.3

Minor BPS

47.9

-0

1.9

65.76

44.8

Associated Gene:

Gene:

IRF6

Ensembl Gene ID:

ENSAPLG00000009319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042821

4873965 - 4881088

7124