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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4874969_4877305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4874969 - 4877305

Intron Length:

2337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATTAC

U12 Branch Point Sequence:

CTGCTATTACCT

Flanking Amino Acid:

MTMALHPRRVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

38.4

Major BPS

62.5

0.31

1.1

55.4

Major PPT

78.3

0.64

0.8

73.4

31.5

Minor 5ss

30.9

-2.2

3.3

38.6

Minor BPS

47.9

-0

1.9

65.76

44.8

Associated Gene:

Gene:

IRF6

Ensembl Gene ID:

ENSAPLG00000009319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037594

4873965 - 4881088

7124