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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4878933_4879037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4878933 - 4879037

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTGGTGGC

5'SS Class:

major

3'SS Sequence:

TTCCTTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TAGCAAATAATC

Flanking Amino Acid:

QETFPFLNINDSPMAPASAE

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.33

1.2

56.4

42.3

Major BPS

71.2

0.53

70.3

31.9

Major PPT

83.7

0.76

0.7

79.4

26.2

Minor 5ss

28.1

-2.5

3.2

32.3

36.4

Minor BPS

43.1

-0.5

1.9

52.77

37.8

Associated Gene:

Gene:

IRF6

Ensembl Gene ID:

ENSAPLG00000009319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042821

4873965 - 4881088

7124

ENSAPLT00000037594

4873965 - 4881088

7124

ENSAPLT00000009705

4873398 - 4881088

7691