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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4879884_4880272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4879884 - 4880272

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAGGTAGC

5'SS Class:

major

3'SS Sequence:

GCTTTTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAGAT

U12 Branch Point Sequence:

AGATGGACAACA

Flanking Amino Acid:

KLFCLETFLSELIAHQKGQI

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

67.4

Major BPS

50.8

0.02

1.1

47.1

36.1

Major PPT

81.1

0.7

0.8

73.5

37.1

Minor 5ss

35.2

-1.7

45.6

42.8

Minor BPS

36.7

-1

2.5

48.96

41.1

Associated Gene:

Gene:

IRF6

Ensembl Gene ID:

ENSAPLG00000009319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042821

4873965 - 4881088

7124

ENSAPLT00000037594

4873965 - 4881088

7124

ENSAPLT00000009705

4873398 - 4881088

7691