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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4880392_4880671_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4880392 - 4880671

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAACT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAAAAA

U12 Branch Point Sequence:

ATTTCTTCAACA

Flanking Amino Acid:

PRERKLIVVQVIPVVARMIY

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

78.1

36.3

Major BPS

49.6

-0

1.1

57.3

34.4

Major PPT

78.5

0.64

0.9

74.4

34.5

Minor 5ss

34.7

-1.7

3.3

49.7

46.3

Minor BPS

74.1

0.75

1.4

82.18

32.4

Associated Gene:

Gene:

IRF6

Ensembl Gene ID:

ENSAPLG00000009319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042821

4873965 - 4881088

7124

ENSAPLT00000037594

4873965 - 4881088

7124

ENSAPLT00000009705

4873398 - 4881088

7691