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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4883493_4883683_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4883493 - 4883683

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAGAT

5'SS Class:

major

3'SS Sequence:

CTTCTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAT

U12 Branch Point Sequence:

TTCCTGGTAATG

Flanking Amino Acid:

LNHVQSKPAKRQRGNWLPLL

Intron Amino Acid Position:

640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

71.2

34.6

Major BPS

69.2

0.48

1.3

69.7

44.2

Major PPT

0.88

0.6

84.1

23.9

Minor 5ss

25.3

-2.8

3.5

47.6

Minor BPS

41.6

-0.7

2.5

51.4

43.9

Associated Gene:

Gene:

TRAF3IP3

Ensembl Gene ID:

ENSAPLG00000009312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048013

4883239 - 4896297

13059

ENSAPLT00000032852

4883239 - 4894392

11154