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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4883960_4885070_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4883960 - 4885070

Intron Length:

1111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

TAACCCTGAAAT

Flanking Amino Acid:

TSQLTAKENEVYVGTEVAEV

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.7

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

74.2

0.54

68.9

Minor 5ss

26.2

-2.7

2.9

29.6

43.4

Minor BPS

60.3

0.4

1.6

74.85

40.5

Associated Gene:

Gene:

TRAF3IP3

Ensembl Gene ID:

ENSAPLG00000009312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048013

4883239 - 4896297

13059

ENSAPLT00000032852

4883239 - 4894392

11154