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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4885220_4885747_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4885220 - 4885747

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCAAA

5'SS Class:

major

3'SS Sequence:

GACTGTTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TGTTTCTCATCA

Flanking Amino Acid:

KMQEAMVQRKDQVFTTQSPP

Intron Amino Acid Position:

498

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.3

74.1

38.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

70.8

0.47

0.9

61.7

44.2

Minor 5ss

34.1

-1.8

2.7

45.6

Minor BPS

57.9

0.24

1.8

72.16

39.8

Associated Gene:

Gene:

TRAF3IP3

Ensembl Gene ID:

ENSAPLG00000009312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032852

4883239 - 4894392

11154

ENSAPLT00000009692

4883238 - 4894392

11155

ENSAPLT00000048013

4883239 - 4896297

13059