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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4885971_4886572_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4885971 - 4886572

Intron Length:

602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGCGC

5'SS Class:

major

3'SS Sequence:

ATTATTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GTTTTCTTACTA

Flanking Amino Acid:

LQAEHISTIEGKLQKEQNQK

Intron Amino Acid Position:

450

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

43.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

81.8

0.71

0.9

78.7

38.9

Minor 5ss

35.6

-1.6

3.5

51.1

45.5

Minor BPS

66.9

0.53

1.6

75.34

36.5

Associated Gene:

Gene:

TRAF3IP3

Ensembl Gene ID:

ENSAPLG00000009312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048013

4883239 - 4896297

13059

ENSAPLT00000032852

4883239 - 4894392

11154

ENSAPLT00000009692

4883238 - 4894392

11155