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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4886709_4886880_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4886709 - 4886880

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGTCAG

5'SS Class:

major

3'SS Sequence:

CCTCTCGCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

CCCCCACTAACA

Flanking Amino Acid:

NLHILQSKLQHTAAQNEQLQ

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

64.3

41.6

Major BPS

64.5

0.36

65.2

28.2

Major PPT

0.45

0.9

35.1

Minor 5ss

41.4

-1

2.8

49.6

Minor BPS

46.2

-0.2

54.54

43.8

Associated Gene:

Gene:

TRAF3IP3

Ensembl Gene ID:

ENSAPLG00000009312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009692

4883238 - 4894392

11155

ENSAPLT00000048013

4883239 - 4896297

13059

ENSAPLT00000032852

4883239 - 4894392

11154