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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4888010_4891587_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4888010 - 4891587

Intron Length:

3578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAGGC

5'SS Class:

major

3'SS Sequence:

TGTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGATTTACA

Flanking Amino Acid:

LLKASEKSWQGQLNEDKLKC

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.2

55.3

42.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

84.1

0.77

0.8

77.2

37.1

Minor 5ss

35.2

-1.7

3.6

45.6

Minor BPS

53.1

0.09

2.3

76.76

39.9

Associated Gene:

Gene:

TRAF3IP3

Ensembl Gene ID:

ENSAPLG00000009312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032852

4883239 - 4894392

11154

ENSAPLT00000009692

4883238 - 4894392

11155

ENSAPLT00000048013

4883239 - 4896297

13059