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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4891684_4891891_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4891684 - 4891891

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCACT

5'SS Class:

strong_major

3'SS Sequence:

CGCTTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

GCCACCTGACTC

Flanking Amino Acid:

EIIQLSSYLKEALHRELLLK

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

75.3

40.8

Major BPS

60.1

0.25

35.6

Major PPT

76.2

0.59

0.8

69.4

31.3

Minor 5ss

40.6

-1

3.2

58.1

46.3

Minor BPS

45.2

-0.3

1.7

48.32

41.7

Associated Gene:

Gene:

TRAF3IP3

Ensembl Gene ID:

ENSAPLG00000009312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048013

4883239 - 4896297

13059

ENSAPLT00000032852

4883239 - 4894392

11154

ENSAPLT00000009692

4883238 - 4894392

11155