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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4892198_4892397_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4892198 - 4892397

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGCCAC

5'SS Class:

major

3'SS Sequence:

TTTTCCATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTCACCTCACTT

Flanking Amino Acid:

TGVKDSSQQTDCGTAVLNKE

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.43

1.1

56.9

42.6

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

88.3

0.86

0.7

86.1

26.6

Minor 5ss

39.4

-1.2

3.1

47.4

42.4

Minor BPS

52.1

0.15

1.9

72.72

44.5

Associated Gene:

Gene:

TRAF3IP3

Ensembl Gene ID:

ENSAPLG00000009312

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009692

4883238 - 4894392

11155

ENSAPLT00000048013

4883239 - 4896297

13059

ENSAPLT00000032852

4883239 - 4894392

11154