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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4896298_4898535_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4896298 - 4898535

Intron Length:

2238

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCCACCGGG

5'SS Class:

weak_major

3'SS Sequence:

GTTTCCCTTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAACAAT

U12 Branch Point Sequence:

TTTCCCTTGAAG

Flanking Amino Acid:

LGYIDTGKLNQETLTTWKAK

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.1

0.05

1.4

49.5

Major BPS

49.4

-0

1.3

57.1

35.8

Major PPT

72.4

0.5

72.3

32.8

Minor 5ss

28.8

-2.4

4.2

42.3

44.9

Minor BPS

0.45

1.5

73.82

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012031

4896244 - 4900766

4523