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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4896615_4898012_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4896615 - 4898012

Intron Length:

1398

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCCTGGCCC

5'SS Class:

major

3'SS Sequence:

CGCCCGCCAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCGCAC

U12 Branch Point Sequence:

GCGCGCGCACCC

Flanking Amino Acid:

GIVNGMLLLRGQEPGLRLQR

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.9

0.31

1.2

56.6

38.9

Major BPS

43.1

-0.4

1.3

46.4

38.9

Major PPT

57.8

0.18

0.9

50.8

32.7

Minor 5ss

23.3

-3.1

3.8

31.1

36.4

Minor BPS

-1.3

2.3

36.12

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036587

4896541 - 4900330

3790