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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4898128_4898508_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4898128 - 4898508

Intron Length:

381

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCACGTCAG

5'SS Class:

major

3'SS Sequence:

ACATGCCATCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

GCGGTCTCACAT

Flanking Amino Acid:

NATGARGLRRVAPSPKEECA

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.2

56.9

47.2

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

0.02

1.1

46.4

40.2

Minor 5ss

21.7

-3.3

3.7

23.1

37.2

Minor BPS

40.5

-0.6

1.8

49.15

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031769

4897888 - 4900330

2443

ENSAPLT00000020521

4897888 - 4900330

2443