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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4898163_4898546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4898163 - 4898546

Intron Length:

384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

CCTGCTGTGACC

Flanking Amino Acid:

TLCILGYIDTDNAMQAVSHA

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.3

36.4

Major BPS

0.22

1.2

52.4

43.3

Major PPT

71.7

0.49

0.8

62.2

34.7

Minor 5ss

44.3

-0.6

2.8

53.8

44.4

Minor BPS

46.4

-0.3

2.1

56.35

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029057

4895771 - 4900330

4560

ENSAPLT00000012310

4896741 - 4900330

3590

ENSAPLT00000048068

4895657 - 4900330

4674

ENSAPLT00000036587

4896541 - 4900330

3790

ENSAPLT00000030309

4897019 - 4900330

3312