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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4899155_4899272_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4899155 - 4899272

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

CTGCCACTAGCA

Flanking Amino Acid:

EVVKEAENTWGGLDMLILNH

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

75.3

0.57

0.9

65.1

41.2

Minor 5ss

28.5

-2.5

3.1

31.8

42.6

Minor BPS

-0.5

2.1

54.99

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012031

4896244 - 4900766

4523

ENSAPLT00000031769

4897888 - 4900330

2443

ENSAPLT00000030309

4897019 - 4900330

3312

ENSAPLT00000029057

4895771 - 4900330

4560

ENSAPLT00000048068

4895657 - 4900330

4674

ENSAPLT00000012310

4896741 - 4900330

3590

ENSAPLT00000036587

4896541 - 4900330

3790