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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4899192_4900279_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4899192 - 4900279

Intron Length:

1088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTGTATTTT

5'SS Class:

weak_major

3'SS Sequence:

GCTTTGTTCTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCAGAA

U12 Branch Point Sequence:

GCCACCAGAAAG

Flanking Amino Acid:

ILPLMGLGLAMLAATSKGAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.3

0.03

1.3

61.2

39.9

Major BPS

47.4

-0.1

0.9

40.6

30.1

Major PPT

56.7

0.15

1.7

68.5

42.1

Minor 5ss

-0.2

2.8

70.2

40.9

Minor BPS

41.5

-0.7

1.8

40.38

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020521

4897888 - 4900330

2443