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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4902909_4903697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4902909 - 4903697

Intron Length:

789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CGTGCTTTAATG

Flanking Amino Acid:

GSIVVVSSMAGKVGFPFTVP

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

72.1

0.5

0.9

65.1

41.2

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

60.3

0.19

1.5

59.22

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011522

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047260

4901680 - 4907027

5348