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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4906119_4906274_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

4906119 - 4906274

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTTGCCT

5'SS Class:

weak_major

3'SS Sequence:

GCTCAATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCATGCTCAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.2

53.6

42.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

72.6

0.51

61.9

43.2

Minor 5ss

35.9

-1.6

3.2

49.7

46.1

Minor BPS

54.6

0.22

72.84

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011522

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047260

4901680 - 4907027

5348