Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_4906470_4919803_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4906470 - 4919803

Intron Length:

13334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGCTGAA

5'SS Class:

major

3'SS Sequence:

ACTACACCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TTATCGTTACTA

Flanking Amino Acid:

SQNIRGSPVQAPLSQVRQPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.2

64.6

37.4

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

63.6

0.31

0.9

54.8

34.7

Minor 5ss

30.7

-2.2

3.4

39.4

46.5

Minor BPS

53.5

0.11

2.3

71.78

40.8

Associated Gene:

Gene:

LAMB3

Ensembl Gene ID:

ENSAPLG00000011137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011586

4906377 - 4941986

35610