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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4920719_4921434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4920719 - 4921434

Intron Length:

716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTGTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCCCAA

U12 Branch Point Sequence:

GTAGCCCCAAGT

Flanking Amino Acid:

FGHGHYLSCWPPCGCWARST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.4

43.3

Major BPS

43.2

-0.4

1.3

46.3

38.7

Major PPT

74.1

0.54

0.9

64.4

41.4

Minor 5ss

36.2

-1.6

3.5

48.3

47.3

Minor BPS

43.9

-0.3

2.2

62.85

46.4

Associated Gene:

Gene:

LAMB3

Ensembl Gene ID:

ENSAPLG00000011137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036972

4920648 - 4943799

23152

ENSAPLT00000011586

4906377 - 4941986

35610