Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_4929841_4930113_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4929841 - 4930113

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTCTGTATG

5'SS Class:

major

3'SS Sequence:

CCTAATGCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

CTCTCCCTAATG

Flanking Amino Acid:

QLDGIVLDFRSPLPTAMLIE

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.3

65.3

Major BPS

69.6

0.49

1.1

69.5

Major PPT

0.43

61.3

39.6

Minor 5ss

40.4

-1.1

2.5

43.2

43.9

Minor BPS

59.6

0.16

1.8

63.6

44.7

Associated Gene:

Gene:

LAMB3

Ensembl Gene ID:

ENSAPLG00000011137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036972

4920648 - 4943799

23152

ENSAPLT00000011586

4906377 - 4941986

35610