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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4935320_4935604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4935320 - 4935604

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

TCTACTCAGATT

Flanking Amino Acid:

AQASSALAAIREQMQGINPN

Intron Amino Acid Position:

743

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.2

31.2

Major BPS

77.7

0.69

83.3

27.7

Major PPT

90.5

0.91

0.6

84.4

30.5

Minor 5ss

25.4

-2.8

3.5

36.8

47.7

Minor BPS

44.7

-0.3

1.9

63.77

41.3

Associated Gene:

Gene:

LAMB3

Ensembl Gene ID:

ENSAPLG00000011137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036972

4920648 - 4943799

23152

ENSAPLT00000011586

4906377 - 4941986

35610