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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4940068_4941062_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4940068 - 4941062

Intron Length:

995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTTTG

5'SS Class:

major

3'SS Sequence:

TTTGTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATCCAT

U12 Branch Point Sequence:

AATTATCCATGC

Flanking Amino Acid:

KRLQQEAEQARNRANAVEGN

Intron Amino Acid Position:

1052

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.2

70.9

41.9

Major BPS

69.5

0.49

1.2

78.7

34.9

Major PPT

84.2

0.77

0.8

77.2

37.1

Minor 5ss

38.8

-1.3

49.5

46.8

Minor BPS

34.8

-1.1

43.98

37.2

Associated Gene:

Gene:

LAMB3

Ensembl Gene ID:

ENSAPLG00000011137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011586

4906377 - 4941986

35610

ENSAPLT00000036972

4920648 - 4943799

23152