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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4941205_4941515_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4941205 - 4941515

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TCCTTCTTGACA

Flanking Amino Acid:

LRFIQERVEEIEAVLGPAER

Intron Amino Acid Position:

1100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

67.6

0.44

1.2

Major PPT

83.5

0.75

0.8

80.5

31.5

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

72.1

0.69

1.2

73.41

38.9

Associated Gene:

Gene:

LAMB3

Ensembl Gene ID:

ENSAPLG00000011137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036972

4920648 - 4943799

23152

ENSAPLT00000011586

4906377 - 4941986

35610