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Intron Name: Anas_platyrhynchos_platyrhynchos_27_4948231_4948794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4948231 - 4948794

Intron Length:

564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

TGCTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

GTCTGTCCGACT

Flanking Amino Acid:

CWSIGVITYILLCGYPPFYE

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

67.4

39.4

Major BPS

0.3

34.1

Major PPT

81.7

0.71

0.8

37.3

Minor 5ss

32.6

-2

2.8

43.2

43.8

Minor BPS

41.7

-0.5

2.2

60.6

43.3

Associated Gene:

Gene:

CAMK1G

Ensembl Gene ID:

ENSAPLG00000010810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011272

4945297 - 4953668

8372