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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5027523_5108966_F

Intron Information:

Intron Rank:

123481

Intron Class:

major

Intron Phase:

Intron Coordinates:

5027523 - 5108966

Intron Length:

81444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TCTTTAAAAACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

73.1

0.58

79.6

29.1

Major PPT

74.9

0.56

73.5

41.9

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

44.9

-0.5

2.2

56.75

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039404

5027277 - 5110175

82899