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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5114396_5119597_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5114396 - 5119597

Intron Length:

5202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATAACGG

5'SS Class:

major

3'SS Sequence:

GTGCATGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

ATGTTGTTATGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

52.3

44.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

64.4

0.32

56.6

43.1

Minor 5ss

36.8

-1.5

3.1

47.9

47.6

Minor BPS

44.2

-0.3

2.4

65.1

45.8

Associated Gene:

Gene:

PLXNA2

Ensembl Gene ID:

ENSAPLG00000009851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043830

5113775 - 5385264

271490