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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5330255_5331064_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5330255 - 5331064

Intron Length:

810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTCAC

5'SS Class:

major

3'SS Sequence:

CCCCCGGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTCCATTTTATT

Flanking Amino Acid:

SISVSQHSLPLSLLVSDAPD

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

63.6

42.9

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

64.4

0.33

0.9

56.4

33.5

Minor 5ss

33.6

-1.9

3.2

44.4

43.5

Minor BPS

49.3

0.03

1.8

70.04

Associated Gene:

Gene:

PLXNA2

Ensembl Gene ID:

ENSAPLG00000009851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043830

5113775 - 5385264

271490

ENSAPLT00000033195

5204187 - 5384269

180083

ENSAPLT00000010346

5258023 - 5385264

127242