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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5383658_5383932_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5383658 - 5383932

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGGC

5'SS Class:

major

3'SS Sequence:

TTCGCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CATTCCTCACGG

Flanking Amino Acid:

DIPSYKSWVERYYADIAKLP

Intron Amino Acid Position:

1747

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.3

72.7

38.2

Major BPS

72.4

0.56

73.5

32.5

Major PPT

72.3

0.5

0.8

65.9

30.2

Minor 5ss

28.4

-2.5

35.8

40.9

Minor BPS

45.6

-0.4

2.2

52.44

47.8

Associated Gene:

Gene:

PLXNA2

Ensembl Gene ID:

ENSAPLG00000009851

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033195

5204187 - 5384269

180083

ENSAPLT00000011375

5258023 - 5385264

127242

ENSAPLT00000010346

5258023 - 5385264

127242

ENSAPLT00000043830

5113775 - 5385264

271490