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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5397910_5398262_F

Intron Information:

Intron Rank:

144248

Intron Class:

major

Intron Phase:

Intron Coordinates:

5397910 - 5398262

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTGAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCTAC

U12 Branch Point Sequence:

TATTCTCTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

51.3

0.03

1.3

52.4

42.7

Major PPT

66.5

0.37

1.1

69.7

34.5

Minor 5ss

31.2

-2.2

3.1

31.3

42.6

Minor BPS

56.1

0.17

1.9

72.14

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022114

5397501 - 5398990

1490