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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5412235_5416867_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5412235 - 5416867

Intron Length:

4633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

GCCCCTATAATG

Flanking Amino Acid:

WIAFCVVKLSGTAADGLTDT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.8

79.6

35.4

Major BPS

75.5

0.63

1.1

34.4

Major PPT

69.1

0.43

0.7

61.4

29.1

Minor 5ss

-1.8

2.8

39.3

40.3

Minor BPS

46.8

-0.3

1.7

45.98

41.1

Associated Gene:

Gene:

CD34

Ensembl Gene ID:

ENSAPLG00000001429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035323

5412156 - 5423799

11644

ENSAPLT00000001428

5412156 - 5422646

10491