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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5418021_5418459_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5418021 - 5418459

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAC

U12 Branch Point Sequence:

AGTTCACTAAGC

Flanking Amino Acid:

EPHVASGVPKPITCHNVKDV

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

66.1

0.4

1.1

69.1

37.9

Major PPT

86.4

0.82

0.8

77.7

36.7

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

47.6

-0.2

2.2

63.95

40.9

Associated Gene:

Gene:

CD34

Ensembl Gene ID:

ENSAPLG00000001429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001428

5412156 - 5422646

10491

ENSAPLT00000035323

5412156 - 5423799

11644