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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5418538_5420751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5418538 - 5420751

Intron Length:

2214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTGAGTGCA

5'SS Class:

major

3'SS Sequence:

GAAAATTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGTGCTTGAAAA

Flanking Amino Acid:

CLRLNESNTCKQFLEMKGSD

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.3

38.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

66.7

0.38

1.1

58.3

46.4

Minor 5ss

28.5

-2.5

36.3

Minor BPS

54.4

0.14

1.7

66.32

39.8

Associated Gene:

Gene:

CD34

Ensembl Gene ID:

ENSAPLG00000001429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001428

5412156 - 5422646

10491

ENSAPLT00000035323

5412156 - 5423799

11644