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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5466720_5467453_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5466720 - 5467453

Intron Length:

734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTGAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TTTTTCCTGAAG

Flanking Amino Acid:

LSAYVIAIICVITVVLVSLA

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

81.4

30.6

Major BPS

0.57

73.6

28.6

Major PPT

81.8

0.72

0.9

24.6

Minor 5ss

37.4

-1.4

3.3

49.4

41.4

Minor BPS

54.5

-0

1.9

68.2

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039979

5465538 - 5474734

9197

ENSAPLT00000028447

5465538 - 5495980

30443