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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5467481_5467818_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5467481 - 5467818

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TTCCTCATAACA

Flanking Amino Acid:

WNPEVPTCHLSAYVIAIICV

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

79.6

0.67

0.9

77.7

36.7

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

62.4

0.39

1.6

73.45

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039979

5465538 - 5474734

9197

ENSAPLT00000028447

5465538 - 5495980

30443