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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5468011_5468632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5468011 - 5468632

Intron Length:

622

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GAATTTTTAATT

Flanking Amino Acid:

NTWSSVQNCACKPVHHDSSP

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

76.1

34.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

100

1.12

0.4

100

Minor 5ss

32.1

-2

2.7

37.9

Minor BPS

68.1

0.65

1.1

74.24

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039979

5465538 - 5474734

9197

ENSAPLT00000028447

5465538 - 5495980

30443