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Intron Name: Anas_platyrhynchos_platyrhynchos_27_5468822_5469841_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5468822 - 5469841

Intron Length:

1020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

ATATTTGTATTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TACTAATTAATA

Flanking Amino Acid:

WHPPQPTCEKITEDRCGAPK

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

75.5

40.6

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

0.4

67.6

42.8

Minor 5ss

37.7

-1.4

50.6

39.9

Minor BPS

56.2

0.19

1.8

66.89

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039979

5465538 - 5474734

9197

ENSAPLT00000028447

5465538 - 5495980

30443